Theme 3: Gut microbiome & microbial pathogenesis

 The HDDC members active in this Affinity group include investigators applying advanced sequencing and informatics to study the commensal gut microbiome and its interaction with the immune system. New and continuing members focused on the commensal microbiome join an accomplished group of established scientists focused on microbial pathogenesis in the intestine and liver.

Leaders: Lynn Bry & Wendy Garrett
HDDC memberInstitutionResearch focus
Blaskus, Emily, PhDHUGut microbiome metabolism: role in health and disease
Banks, Alexander, PhDBWHRole of PPARg phosphorylation in insulin sensitivity
Biddinger, Sudah, MD, PhDMITInsulin signaling in liver and control of lipogensis
Bry, Lynn, MD, PhDBWHHost-commensal-pathogen interactions in the intestine
Collins, Jim, PhDBUSM/WyssSystems analysis of antiobiotic effects on gut micriobiota
Comstock, Laurie, PhDBWHRole of bacteriodales in the intestinal ecosystem
Ersoy, Baran, PhDBWHGut microbiome, gnotobiotics, and metabolism
Fraenkel, Paula, MDBIDMCHepcidin modulators in human hepatocytes and iron overload
Garrett, Wendy, MD, PhDHSPHGut microbiota in immune function and tumorigensis
Gerber, Georg, MD, PhDBWHComputational modeling of gut microbial communities
Greenberg, Andrew, MDNEMCMicriobiota and lipid effects on host metabolism
Kahn, C. Ronald, MD (Core D)JoslinInsulin signaling in gut and liver, and metabolic syndrome
Kahn, Barbara, MDBIDMCGut microbiome, gnotobiotics, and metabolism
Lee, Chih-Hao, PhDHSPHMolecular mechanism governing hepatocyte lipogensis
Maratos-Flier, Eleftheria, MDBIDMCGut microbiome, gnotobiotics, and metabolism
Paw, Barry, MD, PhDBCHGenes involved in liver mitochondrial iron metabolism
Rakoff-Nahoum, Seth, MD, PhDBCHInate and adaptive mucosal immunology
Shoelson, Steven, MD, PhDBWHGut microbiome, gnotobiotics, and metabolism
Spiegelman, Bruce, PhDDFCIGut microbiome, gnotobiotics, and metabolism
Tavakkoli, Ali, MB, BSBWHIntestinal nutrient transport in diabetes & obesity
Associate memberInstitutionResearch focus
Cox, Andrew, PhDBWHHippo pathway in liver development, regeneration, & cancer
Feinberg, Mark, W., MDBWH 
Kalaany, Nada, PhDBCHGut microbiome, gnotobiotics, and metabolism
Tullius, Stefan, G., MD, PhDBWH